M. Irnaten, X. Gallet, F. Fesy, G. Péranzi, J.C. Robert, A. Thomas-Soumarmon, R. Brasseur. "Prediction of epitopes and production of monoclonal antibodies against gastric H,K-ATPase" Protein Engineering; 11(10); 1998; 949-955.
X. Gallet, N. Benhabiles, M. Lewin, R. Brasseur, A. Thomas-Soumarmon. "Prediction of the antigenic sites of the cystic fibrosis transmembrane conductance regulator protein by molecular modelling" Protein Engineering; 8(8); 1995; 829-834.
X. Gallet, B. Charloteaux, A. Thomas, R. Brasseur. "A fast method to predict protein interactions sites from sequences" Journal of Molecular Biology;, 302(4); 2000; 917-926.
M. Marrec-Fairley, A. Piette, X. Gallet, R. Brasseur, H. Hara, C. Fraipont, J.M. Ghuysen, M. Nguyen-Distèche. "Differential functionalities of amphiphilic peptide segments of the cell-septation penicillin-binding protein 3 of Escherichia coli" Molecular Microbiology; 37(5); 2000; 1019-1031.
A. Decreux, A. Thomas, B. Spies, R. Brasseur, P. Van Cutsem and J. Messiaen. "In vitro characterization of the homogalacturonan binding domain of the wall-associated kinase WAK1 using site-directed mutagenesis" Phytochemistry 67 (2006) 1068-1079
C. Bizimungu, A. Thomas, R.Brasseur and M. Vandenbol.“Mutational analysis of the TRE2 oncogene encoding an inactive RabGAP.” Biotechnol Lett 29 (2007) 1927-37
L. Lins, A. Couvineau, C. Rouyer-Fessard, P. Nicole, JJ. Maoret, M. Benhamed, R. Brasseur, A. Thomas, M. Laburthe. "The human VPAC1 receptor : 3D model and mutagenesis of the N-terminal domain" Journal of Biological Chemistry; 276; 2001; 10153-10160.
A. Thomas, N. Benhabiles, R. Meurisse, R. Ngwabije, R. Brasseur. "PEX, Analytical tools for PDB files. II. H-Pex: non-canonical H-bonds in alpha helices" Proteins: Structure, Function and Genetics; 43; 2001; 37-44.
M. Deleu, O. Bouffioux, H. Razafindralambo, M. Paquot, C. Hbid, P. Thonart, P. Jacques and R. Brasseur. “Interaction of surfactin with membranes: a computational approach.” Langmuir 19(8) (2003) 3377-3385.
L. Vanhamme, F. Paturiaux-Hanocq, P. Poelvoorde, D. P. Nolan, L. Lins, J. Van den Abbeele, A. Pays, P. Tebabi, Huang Van Xong, A. Jacquet, N. Voguilevsky, M. Dieu, J. P. Kane, P. De Baetselier, R. Brasseur and E. Pays. “Apolipoprotein L-I is the trypanosome lytic factor of human serum, and is blocked by SRA in Trypanosoma rhodesiense” Nature 422 (2003) 83-87
D. Pérez-Morga, B. Vanhollebeke, F. Paturiaux-Hanocq, D. P. Nolan, L. Lins, L. Vanhamme, P. Tebabi, A. Pays, P. Poelvoorde, A. Jacquet, R. Brasseur and E. Pays. “Apolipoprotein L-I promotes trypanosomes lyses by forming pores in lysosomal membrane“. Science 309 (2005) 469-472
S. Dahimène, S. Alcoléa, P. Naud, P. Jourdon, D. Escande, R. Brasseur, A. Thomas, I. Baró, and J. Merot."The N-terminal juxtamembranous domain of KCNQ1 is critical for channel surface expression.Implications in the Romano-Ward LQT1 syndrome."Circ Res 99(10) (2006) 1076-83.
N.Q. Nguyen, S.P. Tabruyn, L. Lins, M. Lion, A.M. Cornet, F. Lair, F. Rentier-Delrue, R. Brasseur, J.A. Martial and I. Struman. “Prolactin/growth hormone-derived antiangiogenic peptides highlight a potential role of tilted peptides in angiogenesis” P Natl Acad Sci USA 103(39) (2006) 14319-24
R.F. Epand, A. Thomas, R. Brasseur, S.A. Vishwanathan, E. Hunter and R.M. Epand.“Juxtamembrane protein segments that contribute to recruitment of cholesterol into domains.” Biochemistry- 45 (2006) 6105-6114.
B. Charloteaux, A. Lorin, JM. Crowet, V. Stroobant, L. Lins, A. Thomas and R. Brasseur.“The N-terminal 12-residue long peptide of HIV gp41 is the minimal peptide sufficient to induce significant T-cell like membrane destabilization in vitro.” J Mol Biol 359 (2006) 597-609
P-P. Prevot, B. Adam, K. Zouaoui Boudjeltia, M. Brossard, L. Lins, P.Cauchie, R. Brasseur, M. Vanhaeverbeek, L. Vanhamme and E. Godfroid. “Anti-haemostatic effects of a serpin from the saliva of the tick Ixodes ricinus” J Biol Chem 281(36) (2006) 26361-26369
L. Lins, K. El Kirat, B. Charloteaux, C. Flore, V. Stroobant, A. Thomas, Y. Dufrêne and R. Brasseur.“Lipid-destabilizing properties of the hydrophobic helices H8 and H9 from colicin E1“ Mol Membr Biol 24(5) (2007) 419-430
L. Lins, B. Charloteaux, C. Heinen, A. Thomas, R. Brasseur. "«De novo» design of peptides with specific lipid-binding properties" Biophysical Journal; 90; 2006; 470-479.
M. Decaffmeyer, L. Lins, B. Charloteaux, M-H. VanEyck, Annick Thomas, R. Brasseur. ”Rational design of complementary peptides to the ßAmyloid 29-42 fusion peptide: An application of PepDesign” Biochimica Biophysica Acta; 1758; 2005; 320-327.
A. Thomas, S. Deshayes, M. Decaffmeyer, M.H. Van Eyck, B. Charloteaux, Robert Brasseur. "Prediction of Peptide Structure: how far are we?" Proteins; Structure, Function and Bioinformatics; 65 (2006) 889-897.
A. Thomas and R. Brasseur. “Tilted peptides: The History” Current Protein and Peptide Science 7 (2006) 523-527.
N.Q. Nguyen, S.P. Tabruyn, L. Lins, M. Lion, A.M. Cornet, F. Lair, F. Rentier-Delrue, R. Brasseur, J.A. Martial and I. Struman.“Prolactin/growth hormone-derived antiangiogenic peptides highlight a potential role of tilted peptides in angiogenesis” P Natl Acad Sci USA 103(39) (2006) 14319-24.
L. Lins, K. El Kirat, B. Charloteaux, C. Flore, V. Stroobant, A. Thomas, Y. Dufrêne and R. Brasseur.“Lipid-destabilizing properties of the hydrophobic helices H8 and H9 from colicin E1“ Mol Membr Biol 24(5) (2007) 419-430.
A. Lorin, L. Lins, V. Stroobant, R. Brasseur and B. Charloteaux.“Determination of the minimal fusion peptide of Bovine Leukemia Virus gp30.“Biochem Biophys Res Commun 355 (2007) 649-653.
J.M. Crowet, L. Lins, I. Dupiereux, B. Elmoualij, A. Lorin, B. Charloteaux, V. Stroobant, E. Heinen and R Brasseur."Tilted properties of the 67-78 fragment of a-synuclein are responsible for membrane destabilization and neurotoxicity"
Proteins 68(4) (2007) 936-947.
A. Lorin, L. Lins, V. Stroobant, R. Brasseur and B. Charloteaux.“The minimal fusion peptide of Simian Immunodeficiency Virus corresponds to the 11 first residues of gp32.” J Pept Sci 14 (2007) 423-428.
L. Lins and R. Brasseur. “Tilted peptides: a structural motif involved in protein membrane insertion?.” J Pept Sci 14 (2007) 416-422
S. Deshayes, M. Decaffmeyer, R.Brasseur and A. Thomas. “Structural polymorphism of two CPP: An important parameter of activity.” BBA – Biomembranes 1778 (2008) 1197-1205
S. Vishwanathan, A. Thomas, R. Brasseur, R. Epand, E. Hunter and R. Epand.
“Hydrophobic substitutions in the first residue of the CRAC segment of the gp41 protein of HIV.” Biochemistry 47 (2008) 124-130
Peuvot, A.Schanck, M.Deleers, R. Brasseur. "Piracetam induced changes to membrane physical properties: a combined approach by 31P NMR and conformational analysis" Biochemical Pharmacology; 50; 1995; 1129-1134.
T. Pillot, L. Lins, M. Goethals, B. Vanloo, J. Baert, J. Vandekerckhove, M. Rosseneu, R. Brasseur. "The 118-135 peptide of the human prion protein forms amyloid fibrils and induces liposome fusion" Journal of Molecular Biology; 274; 1997; 381-393.
R. Brasseur, T. Pillot, L. Lins, J. Vandekerckhove, M. Rosseneu. "Peptides in membranes: Tipping the balance of membrane stability" TIBS; 22; 1997; 167-171.
L. Lins, B. Charloteaux, A. Thomas, R. Brasseur. "Computational study of lipid-destabilising protein fragments: towards a comprehensive view of tilted peptides" Proteins: Structure, Function and Genetics; 44; 2001; 435-447.
B. Charloteaux, L. Lins, H. Moereels, R. Brasseur. "Analysis of the C-terminal membrane anchor domains of the hepatitis C virus glycoproteins E1 and E2 : Towards a topological model" Journal of Virology; 76(4); 2001; 1944-1958
O. Bouffioux, F. Basyn, R. Rezsohazy, R.Brasseur. "Structure prediction of CPPs and iterative development of novel CPPs" in "CRC handbook of Cell penetrating peptides" (2002) Ü Langel, CRC Press, Boca Raton, FL 33431, USA.
K.R.O. Hazlett, D.L. Cox, M. Decaffmeyer, D.C. Desrosiers, M.P. Bennet, C.J. La Vake, M.E. La Vake, A.D. Alberts, R. Brasseur and J.D. Radolf. “TP0453, a concealed outer membrane protein of treponema pallidum, enhances membrane permeability. J Bacteriol 187(18) (2005) 6499-6508
K. El Kirat, L. Lins, R. Brasseur and Y. Dufrêne.“Fusogenic tilted peptides induce nanoscale holes in supported phosphatidylcholine bilayers”. Langmuir 21 (2005) 3116-3121
K. El Kirat, L. Lins, R. Brasseur and Y. Dufrêne.“Nanoscale modification of supported lipid membrane: synergetic effect of phospholipase D and viral fusion peptides”. J Biomed Nanotech 1 (2005) 1-8.
A. Chahboune, M. Decaffmeyer, R. Brasseur and B. Joris. “Membrane topology of the Escherichia coli AmpG permease required for recycling of cell wall anhydro-muropeptides and AmpC b-lactamase induction”. Antimicrob Agents Chemother 49(3) (2005) 1145-1149
S. Ravault, O. Soubias, O. Saurel, A. Thomas, R. Brasseur and A. Milon. “Fusogenic Alzheimer’s peptide fragment Ab(29-42) in interaction with lipid bilayers: secondary structure, dynamics and specific interaction with phosphatidylethanolamine polar heads as revealed by solid state NMR“Protein Sci 14 (2005) 1181-1189
I. Dupiereux, W. Zorzi, L. Lins, R. Brasseur, P. Colson, E. Heinen and B.Elmoualij. “Interaction of the 106-126 prion peptide with lipid membranes and potentiel implication of neurotoxicity“. Biochem Biophys Res Commun 331 (2005) 894-901
D. Pérez-Morga, B. Vanhollebeke, F. Paturiaux-Hanocq, D. P. Nolan, L. Lins, L. Vanhamme, P. Tebabi, A. Pays, P. Poelvoorde, A. Jacquet, R. Brasseur and E. Pays.“Apolipoprotein L-I promotes trypanosomes lyses by forming pores in lysosomal membrane“.Science 309 (2005) 469-472
B. Kerfelec , M. Allouche , D. Colin , M-H. Van Eyck, R. Brasseur, A. Thomas
"Computational study of colipase interaction with lipid droplets and bile salt micelles" Proteins 72 (1) (2008) in press
A. Thomas, O. Bouffious, D. Geeuricks, R. Brasseur. "Pex, analytical tools for PDB files. I. GF-Pex: basic file to describe a protein" Proteins: Structure, Function and Genetics; 43(1); 2001; 28-36.
A. Thomas, N. Benhabiles, R. Meurisse, R. Ngwabije, R. Brasseur. "Pex, analytical tools for PDB files. II. H-Pex: noncanonical H-bonds in alpha-helices" Proteins: Structure, Function and Genetics; 43(1); 2001; 37-44.
A. Thomas, R. Meurisse, B. Charloteaux and R. Brasseur. “Aromatic side chain interaction in proteins. I. Main structural features”.Proteins 48(4) (2002) 628-634
A. Thomas, R. Meurisse and R. Brasseur.“Aromatic side chain interaction in proteins. II. Near- and far-sequence Phe-X pairs”.Proteins 48(4) (2002) 635-644
L. Lins, A Thomas. and R. Brasseur.“Analysis of accessible surface of residues in proteins“Protein Sci 12 (2003) 1406-1417
R. Meurisse, R. Brasseur and A. Thomas.“Aromatic side chain interactions in proteins. Near- and far-sequence His-X pairs”. BBA Biomembranes 1649 (2003) 85-96
R. Meurisse, R. Brasseur and A. Thomas. “Aromatic side chain interactions in proteins. Near- and far-sequence Tyr-X pairs”. Proteins 54 (2004) 478-490
A. Thomas, A. Milon and R. Brasseur.“Partial atomic charges of amino acids in proteins” Proteins 56(1) (2004) 102-109
D. Lejeune, N. Delsaux, B. Charloteaux, A. Thomas, R. Brasseur. "Protein-nucleic acid recognition: Statistical analysis of atomic interactions and influence of DNA structure" test Proteins: Structure, Function and Bioinformatics; 61(2); 2005; 258-271.
